create_analysis_object

Module: workflow.py

Factory that creates a MultiSampleAnalysis object for multi-sample nanopore workflows.

Parameters

• sample_paths (dict[str, str | Path]): Mapping from sample id to input file path.
• sample_to_group (dict[str, str] | None): Optional sample-to-label mapping for supervised modeling.
• reader (str): Input reader type: "abf" or "csv".
• reader_kwargs (dict[str, Any] | None): Reader-specific keyword arguments.

Returns

• MultiSampleAnalysis instance.